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A list of all the posts and pages found on the site. For you robots out there is an XML version available for digesting as well.
Pages
Posts
Future Blog Post
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Blog Post number 4
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This is a sample blog post. Lorem ipsum I can’t remember the rest of lorem ipsum and don’t have an internet connection right now. Testing testing testing this blog post. Blog posts are cool.
Blog Post number 3
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Blog Post number 2
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Blog Post number 1
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portfolio
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publications
Enabling Multimodal User Interactions for Genomics Visualization Creation
Published in IEEE Visualization and Visual Analytics (VIS), 2023
Recommended citation: Qianwen Wang∗, Xiao Liu∗, Man Qing Liang∗, Sehi L’Yi, and Nils Gehlenborg (Oct. 2023). “Enabling Multimodal User Interactions for Genomics Visualization Creation”. 2023 IEEE Visualization and Visual Analytics (VIS). IEEE. doi: 10.1109/vis54172.2023.00031. https://doi.ieeecomputersociety.org/10.1109/VIS54172.2023.00031
Discovering type I cis-AT polyketides through computational mass spectrometry and genome mining with Seq2PKS
Published in Nature Communications, 2024
Recommended citation: Donghui Yan, Muqing Zhou, Abhinav Adduri, Yihao Zhuang, Mustafa Guler, Sitong Liu, Hyonyoung Shin, Torin Kovach, Gloria Oh, Xiao Liu, Yuting Deng, Xiaofeng Wang, Liu Cao, David H. Sherman, Pamela J. Schultz, Roland D. Kersten, Jason A. Clement, Ashootosh Tripathi, Bahar Behsaz, and Hosein Mohimani (2024). “Discovering type I cis-AT polyketides through computational mass spectrometry and genome mining with Seq2PKS”. Nature Communications. https://doi.org/10.1038/s41467-024-49587-1
talks
Characterization and clinical significance of the intra and inter-tumor spatial immune heterogeneity using 3-dimensional multiplexed phenotyping in non-small cell lung cancer
Published:
Miguel Lopez de Rodas1, Zachary Frohock2, Xiao Liu3, Noelia Vilarino1,4, Viviana Ahumada1, Scott Gettinger1, R Krishna Murthy Karuturi5, Joshy George3, Yi Li3 and Kurt Schalper1
DNA bendability regulates transcription factor pioneer binding to nucleosomes
Published:
Xiao Liu1,2, Luca Mariani2, Martha L Bulyk2,3
Genomic sequence context and histone marks regulate pioneer binding to nucleosomes
Published:
Luca Mariani1, Xiao Liu1,2, Kwangwoon Lee1, Stephen S Gisselbrecht1, Philip A Cole1,3, Martha L Bulyk1,4
teaching
21-120 Differential and Integral Calculus
Undergraduate, Carnegie Mellon Univeristy, Department of Mathematical Sciences, 2019
Teaching Assistant
17-214/514 Principles of Software Construction
Graduate, Carnegie Mellon Univeristy, School of Computer Science, 2021
Teaching Assistant
BMI713 Computing Skills for Biomedical Sciences
Graduate, Harvard Medical School, Department of Biomedical Informatics, 2023
Teaching Fellow
BMI715 Computational Statistics for Biomedical Sciences
Graduate, Harvard Medical School, Department of Biomedical Informatics, 2023
Teaching Fellow